Publications of Dr Jano van Hemert
2023
[115]Baseline retinal vascular bed area on ultra-wide field fluorescein angiography correlates with the anatomical outcome of diabetic macular oedema to ranibizumab therapy: two-year analysis of the DAVE Study (, , , , , , , and ), In Eye, volume 37, . [bibtex]
2022
[114] Choroidal vascular alterations evaluated by ultra-widefield indocyanine green angiography in central serous chorioretinopathy (, , and ), In Graefes Arch Clin Exp Ophthalmol, volume 260, . [bibtex] [url]
[113] Clinical significance of metabolic quantification for retinal nonperfusion in diabetic retinopathy (, , and ), In Scientific Reports, volume 12, . [bibtex] [url] [doi]
[112]Multi-modal retinal scanning to measure retinal thickness and peripheral blood vessels in multiple sclerosis (, , , , and ), In Sci. Rep., Springer Science and Business Media LLC, volume 12, . [bibtex]
2021
[111] Effects of refractive power on quantification using ultra-widefield retinal imaging (, , , and ), In BMC Ophthalmology, volume 21, . [bibtex] [url] [doi]
[110]Retinal vascular bed area on ultra-wide field fluorescein angiography indicates the severity of diabetic retinopathy (, , , , , , , , and ), In Br J Ophthalmol, . [bibtex] [doi]
[109]A New Biomarker Quantifying The Effect Of Anti-VEGF Therapy In Eyes With Proliferative Diabetic Retinopathy On Ultra-wide Field Fluorescein Angiography: Recovery Study (, , , , , , , , and ), In Retina, . [bibtex]
[108] Macular Microvascular Changes and Their Correlation With Peripheral Nonperfusion in Branch Retinal Vein Occlusion (, , , and ), In Am J Ophthalmol, volume 225, . [bibtex] [url] [doi]
[107] Relationship between distribution and severity of non-perfusion and cytokine levels and macular thickness in branch retinal vein occlusion (, , , and ), In Scient Rep, volume 11, . [bibtex] [url] [doi]
2020
[106]Fractal analysis of retinal vasculature in normal subjects on ultra-wide field fluorescein angiography (, , , , , , , and ), In Int. J. Ophthalmol., volume 13, . [bibtex]
[105] Quantitative analysis of choroidal vasculature in polypoidal choroidal vasculopathy using ultra-widefield indocyanine green angiography (, , and ), In Nature Scient Rep, volume 10, . [bibtex] [url] [doi]
[104] Retinal vascular caliber association with nonperfusion and diabetic retinopathy severity depends on vascular caliber measurement location (, , , , , , , , , , , and ), In Ophthalmol Retina, . [bibtex] [url] [doi]
[103] Distribution of peripheral lesions identified by mydriatic ultra-wide field fundus imaging in diabetic retinopathy (, , , , , , , , and ), In Graefe's Archive for Clinical and Experimental Ophthalmology, volume 258, . [bibtex] [url] [doi]
[102] Association between hypertension and retinal vascular features in ultra-widefield fundus imaging (, , , , , , , , , , , , , , and ), In Open Heart, volume 7, . [bibtex] [url] [doi]
[101] Distribution and Location of Vortex Vein Ampullae in Healthy Human Eyes as Assessed by Ultra-Widefield Indocyanine Green Angiography (, , , , , , , , and ), In Ophthalmol Retina, volume 4, . [bibtex] [url] [doi]
[100] Peripheral extent of the choroidal circulation by ultra-widefield indocyanine green angiography in healthy eyes (, , , , , , , , and ), In Br J Ophthalmol, . [bibtex] [url] [doi]
[99]Optic Disc and Fovea Localisation in Ultra-widefield Scanning Laser Ophthalmoscope Images Captured in Multiple Modalities (, , , , , and ), In Communications in Computer and Information Science (Zheng, Yalin, Williams, Bryan M., Chen, Ke, eds.), Springer International Publishing, . [bibtex] [doi]
2019
[98] Effect of phase-plate adjustment on retinal image sharpness and visible retinal area on ultrawide-field imaging (, , , , , , and ), In Eye, Springer Nature America, . [bibtex] [url] [doi]
[97] Classification of Regions of Nonperfusion on Ultra-widefield Fluorescein Angiography in patients with Diabetic Macular Edema (, , , , , , , , and ), In Am J Ophthalmol, Elsevier, . [bibtex] [url] [doi]
[96]Distribution of Non-perfusion and Neovascularization on Ultra-Wide Field Fluorescein Angiography in Proliferative Diabetic Retinopathy (RECOVERY Study): Report 1 (, , , , , , , , , and ), In Am J Ophthalmol, . [bibtex]
[95]Severity of diabetic macular edema correlates with retinal vascular bed area on ultra-wide field fluorescein angiography. DAVE Study. (, , , , , , , , and ), In Retina, . [bibtex]
[94]Relationship Between Retinal Fractal Dimension and Non-perfusion in Diabetic Retinopathy on Ultra-Wide Field Fluorescein Angiography (, , , , , , , , , , , , and ), In Am J Ophthalmol, . [bibtex]
2018
[93] A Novel Adaptive Deformable Model for Automated Optic Disc and Cup Segmentation to Aid Glaucoma Diagnosis (, , , , , and ), In J Med Syst, volume 42, . [bibtex] [url] [doi]
[92] Changes in retinal ischaemic index correlate with recalcitrant macular oedema in retinal vein occlusion: WAVE study (, , , , and ), In Br J Ophthalmol, BMJ Publishing Group Ltd, . [bibtex] [url] [doi]
[91]A Graph Cut Approach to Artery/Vein Classification in Ultra-Widefield Scanning Laser Ophthalmoscopy (, , , , and ), In IEEE Trans Med Imag, volume 37, . [bibtex] [doi]
[90] Precise Measurement of Retinal Vascular Bed Area and Density on Ultra-wide Fluorescein Angiography in Normal Subjects (, , , , , and ), In Am J Ophthalmol, Elsevier, volume 188, . [bibtex] [url] [doi]
[89] Comparison of subjective assessment and precise quantitative assessment of lesion distribution in diabetic retinopathy (, , , , , , and ), In JAMA Ophthalmology, volume 136, . [bibtex] [url] [doi]
[88] Ultra-Wide-Field Fluorescein Angiography-Guided Normalization of Ischemic Index Calculation in Eyes With Retinal Vein Occlusion (, , , , , , and ), In Invest. Ophthalmol. Vis. Sci., volume 59, . [bibtex] [url]
2017
[87] Distribution of Nonperfusion Area on Ultra-widefield Fluorescein Angiography in Eyes With Diabetic Macular Edema: DAVE Study (, , , , , , , , and ), In Am J Ophthalmol, volume 180, . [bibtex] [url] [doi]
[86] Combined high contrast and wide field of view in the scanning laser ophthalmoscope through dual detection of light paths (, , and ), In Journal of Biomedical Optics, volume 22, . [bibtex] [url] [doi]
[85] Choroidal vascular abnormalities by UWF ICGA in central serous chorioretinopathy (, , and ), In Acta Ophthalmologica, Wiley, volume 95, . [bibtex] [url] [doi]
[84] Hemorrhage and/or Microaneurysm Severity and Count in Ultrawide Field Images and Early Treatment Diabetic Retinopathy Study Photography (, , , , , , , and ), In Ophthalmology, volume 124, . [bibtex] [url] [doi]
2016
[83] Regional Image Features Model for Automatic Classification between Normal and Glaucoma in Fundus and Scanning Laser Ophthalmoscopy Images (, , , , , , and ), In J Med Syst, volume 40, . [bibtex] [url] [doi]
[82] Scientific Workflows: Moving Across Paradigms (, , , , and ), In ACM Comput. Surv., ACM, volume 49, . [bibtex] [url] [doi]
[81] Ultra-widefield Imaging of the Peripheral Retinal Vasculature in Normal Subjects (, , , , and ), In Ophthalmology, volume 123, . [bibtex] [url] [doi]
[80]Measuring the precise area of peripheral retinal non-perfusion using ultra-widefield imaging and its correlation with the ischaemic index (, , , , and ), In Br J Ophthalmol, volume 100, . [bibtex] [doi]
2015
[79] Application of a wide-field phantom eye for optical coherence tomography and reflectance imaging (, , , and ), In J Mod Optics, volume 62, . [bibtex] [url] [doi]
[78]Retinal Area Detector From Scanning Laser Ophthalmoscope Images for Diagnosing Retinal Diseases (, , , and ), In IEEE J Biomed Health Inform, volume 19, . [bibtex] [doi]
[77] Assessment of Accuracy and Precision of Quantification of Ultra-Widefield Images (, , , and ), In Ophthalmology, volume 122, . [bibtex] [url] [doi]
[76]Not All Retina Is Created Equal: Metabolic Quantification of Ultra-Widefield Images (, , , and ), In Ophthalmology, volume 122, . [bibtex]
[75]Diabetic Retinopathy Severity and Peripheral Lesions Are Associated with Nonperfusion on Ultrawide Field Angiography (, , , , , , , and ), In Ophthalmology, volume 122, . [bibtex]
2014
[74]Precise montaging and metric quantification of retinal surface area from ultra-widefield fundus photography and fluorescein angiography. (, , , , , and ), In Ophthalmic Surg Lasers Imaging Retina, volume 45, . [bibtex] [doi]
[73]Quantification of Ultra-Widefield Retinal Images (, , , and ), In Retina Today, . [bibtex]
[72] Superpixel Based Retinal Area Detection in SLO Images (, , , and ), In Computer Vision and Graphics (LJ Chmielewski, R Kozera, B-S Shin, KW Wojciechowski, eds.), Springer, volume 8671, . [bibtex] [url] [doi]
[71] Blood vessel segmentation and width estimation in ultra-wide field scanning laser ophthalmoscopy (, , , , , , , , and ), In Biomed. Opt. Express, OSA, volume 5, . [bibtex] [url] [doi]
2013
[70]Automatic Extraction of the Optic Disc Boundary for Detecting Retinal Diseases (, , , , and ), In Comp Graphics Imag (L Linsen, M Kampel, eds.), ACTA Press, volume 798, . [bibtex] [doi]
[69] Automatic extraction of retinal features from colour retinal images for glaucoma diagnosis: A review (, , and ), In Comput Med Imaging Graph, Elsevier Science, volume 37, . [bibtex] [url]
[68]Towards automatic detection of abnormal retinal capillaries in ultra-widefield-of-view retinal angiographic exams (, , , , and ), In Conf Proc IEEE Eng Med Biol Soc, . [bibtex] [doi]
2012
[67]Reducing Data Transfer in Service-Oriented Architectures: The Circulate Approach ( and ), In IEEE T Services Computing, volume 5, . [bibtex]
[66]EnzML: multi-label prediction of enzyme classes using InterPro signatures (, , and ), In BMC Bioinformatics, volume 13, . [bibtex]
2011
[65] Service Infrastructure for Cross-Matching Distributed Datasets Using OGSA-DAI and TAP (, , , , , and ), In Astronomical Data Analysis Software and Systems XX (IN Evans, A Accomazzi, DJ Mink, AH Rots, eds.), Astronomical Society of the Pacific, volume 442, . [bibtex] [pdf]
[64] A user-friendly web portal for T-Coffee on supercomputers (, , , , and ), In BMC Bioinformatics, volume 12, . [bibtex] [url] [doi]
[63]Managing dynamic enterprise and urgent workloads on clouds using layered queuing and historical performance models (, , , , and ), In Simulation Modelling Practice and Theory, volume 19, . [bibtex]
[62]Special Issue: Portals for life sciences—Providing intuitive access to bioinformatic tools (, , and ), In Concurrency and Computation: Practice and Experience, Wiley, volume 23, . [bibtex]
[61] Automatically Identifying and Annotating Mouse Embryo Gene Expression Patterns (, and ), In Bioinformatics, volume 27, . [bibtex] [url] [doi]
[60]Generating web-based user interfaces for computational science (, , , and ), In Concurrency and Computation: Practice and Experience, Wiley, volume 23, . [bibtex]
[59] A Generic Parallel Processing Model for Facilitating Data Mining and Integration (, , and ), In Parallel Computing, Elsevier, volume 37, . [bibtex] [url]
[58] Performance database: capturing data for optimizing distributed streaming workflows (, , , and ), In Philos T R Soc A, volume 369, . [bibtex] [url] [doi]
[57] Discovering the suitability of optimisation algorithms by learning from evolved instances ( and ), In Annals of Mathematics and Artificial Intelligence, volume 61, . [bibtex] [url] [doi]
[56] Validation and mismatch repair of workflows through typed data streams (, , , and ), In Philos T R Soc A, volume 369, . [bibtex] [url] [doi]
2010
[55] Correcting for intra-experiment variation in Illumina BeadChip data is necessary to generate robust gene-expression profiles (, , , , , , , and ), In BMC Genomics, volume 11, . [bibtex] [url] [doi]
[54] Towards Optimising Distributed Data Streaming Graphs using Parallel Streams (, , and ), In Data Intensive Distributed Computing, ACM, . [bibtex] [url]
[53] An Open Source Toolkit for Medical Imaging De-Identification (, , and ), In European Radiology, volume 20, . [bibtex] [url]
[52]Understanding TSP Difficulty by Learning from Evolved Instances (, and ), In Collective Optimization, . [bibtex]
[51]Understanding TSP Dfficulty by Learning from Evolved Instances (, and ), In Learning and Intelligent Optimization (Blum, C, ed.), . [bibtex]
[50]Federated Enactment of Workflow Patterns (, , , , and ), In Euro-Par (D'Ambra, P, M Guarracina, D Talia., eds.), Springer, volume LNCS 6271, . [bibtex]
2009
[49]Letter to the Editor: Abolish Conference Proceedings (), In Communications of the ACM, volume 52, . [bibtex] [doi]
[48] Towards a Virtual Fly Brain (), In Phil Trans R Soc A, volume 367, . [bibtex] [pdf] [doi]
[47]A distributed architecture for data mining and integration (, , , and ), In Data-Aware Distributed Computing, ACM, volume 2, . [bibtex] [doi]
[46]An E-infrastructure to Support Collaborative Embryo Research (, , and ), In Cluster Computing and the Grid, IEEE Computer Society, volume 9, . [bibtex] [doi]
[45] The Circulate Architecture: Avoiding Workflow Bottlenecks Caused By Centralised Orchestration (, and ), In Cluster Computing, volume 12, . [bibtex] [url]
[44] Portals for Life Sciences—a Brief Introduction ( and ), In Portals for Life Sciences (Gesing, S, van Hemert, J, eds.), volume 1, . [bibtex] [pdf]
[43]Automating Gene Expression Annotation for Mouse Embryo (, , and ), In Advanced Data Mining and Applications, volume 5, . [bibtex]
[42]Giving Computational Science a Friendly Face ( and ), In Zero-In, volume 1, . [bibtex]
[41]Exploiting Fruitful Regions in Dynamic Routing using Evolutionary Computation ( and ), In Bio-inspired Approaches for Vehicle Routing (Pereira Babtista, F, Tavares, J, eds.), Springer, volume 161, . [bibtex]
[40]Rapid development of computational science portals (), In Portals for Life Sciences (Gesing, S, van Hemert, J, eds.), volume 1, . [bibtex]
[39]Rapid chemistry portals through engaging researchers (, and ), In IEEE e-Science, volume 5, . [bibtex]
[38]The Evolutionary Transition Algorithm: Evolving Complex Solutions out of Simpler Ones ( and ), In Nature-Inspired Algorithms for Optimisation (Raymond Chiong, ed.), Springer, volume 193, . [bibtex]
[37]Using the DCC Lifecycle Model to Curate a Gene Expression Database: A Case Study ( and ), In International Journal of Digital Curation, volume 4, . [bibtex]
2008
[36]Orchestrating Data-Centric Workflows (, and ), In Cluster Computing and the Grid, IEEE Computer Society, volume 8, . [bibtex]
[35]Eliminating the Middle Man: Peer-to-Peer Dataflow (, and ), In High Performance Distributed Computing, ACM, volume 17, . [bibtex]
[34] Scientific Workflow: A Survey and Research Directions ( and ), In Parallel Processing and Applied Mathematics, Springer, volume 4967, . [bibtex] [url]
[33]Matching Spatial Regions with Combinations of Interacting Gene Expression Patterns ( and ), In BioInformatics Research and Development (M Elloumi, \emphet al., eds.), Springer, volume 2, . [bibtex]
[32]A Novel Visual Discriminator for Network Traffic Patterns ( and ), In Advanced Engineering Computing and Applications in Sciences, volume 2, . [bibtex] [doi]
[31]Graph Colouring Heuristics Guided by Higher Order Graph Properties ( and ), In Evol Comput in Comb Optim (van Hemert, J, Cotta, C, eds.), Springer, volume 4972, . [bibtex]
2007
[30] Mining spatial gene expression data for association rules ( and ), In BioInformatics Research and Development (S Hochreiter, R Wagner, eds.), Springer, volume 4414, . [bibtex] [pdf]
2006
[29]Neighborhood Searches for the Bounded Diameter Minimum Spanning Tree Problem Embedded in a VNS, EA, and ACO (, and ), In Genetic and Evolutionary Computation (Maarten Keijzer et al., ed.), ACM, volume 2, . [bibtex] [pdf]
[28] Evolving combinatorial problem instances that are difficult to solve (), In Evolutionary Computation, volume 14, . [bibtex] [url]
[27]Improving Graph Colouring Algorithms and Heuristics Using a Novel Representation ( and ), In Evol Comput in Comb Optim (J Gottlieb, G Raidl, eds.), Springer, volume 3906, . [bibtex] [pdf]
[26]Increasing the efficiency of graph colouring algorithms with a representation based on vector operations ( and ), In Journal of Software, volume 1, . [bibtex] [pdf]
2005
[25]Evolutionary Transitions as a Metaphor for Evolutionary Optimization (, and ), In Advances in Artificial Life (M Capcarrere, AA Freitas, PJ Bentley, CG Johnson, J Timmis, eds.), Springer, volume 3630, . [bibtex] [pdf]
[24]Transition Models as an incremental approach for problem solving in Evolutionary Algorithms (, , and ), In Genetic and Evolutionary Computation (H-G Beyer et al., ed.), ACM Press, volume 7, . [bibtex] [pdf]
[23]Complexity Transitions in Evolutionary Algorithms: Evaluating the impact of the initial population (, and ), In Congress on Evolutionary Computation, IEEE Press, volume 7, . [bibtex] [pdf]
[22]Property analysis of symmetric travelling salesman problem instances acquired through evolution (), In Evol Comput in Comb Optim (G Raidl, J Gottlieb, eds.), Springer, volume 5, . [bibtex] [pdf]
[21]Heuristic Colour Assignment Strategies for Merge Models in Graph Colouring (, and ), In Evol Comput in Comb Optim (G Raidl, J Gottlieb, eds.), Springer, volume 3448, . [bibtex] [pdf]
2004
[20]Robust parameter settings for variation operators by measuring the resampling ratio ( and ), In Journal of Heuristics, volume 10, . [bibtex]
[19]Dynamic Routing Problems with Fruitful Regions: Models and Evolutionary Computation ( and ), In Parallel Problem Solving from Nature (Xin Yao, Edmund Burke, Jose A Lozano, Jim Smith, Juan J Merelo-Guervós, John A Bullinaria, Jonathan Rowe, Peter Ti\vno Ata Kabán, Hans-Paul Schwefel, eds.), Springer, volume 3242, . [bibtex] [pdf]
[18]A Study into Ant Colony Optimization, Evolutionary Computation and Constraint Programming on Binary Constraint Satisfaction Problems ( and ), In Evol Comput in Comb Optim (J Gottlieb, G Raidl, eds.), Springer, volume 3004, . [bibtex] [pdf]
[17] Phase transition properties of clustered travelling salesman problem instances generated with evolutionary computation ( and ), In Parallel Problem Solving from Nature (Xin Yao, Edmund Burke, Jose A Lozano, Jim Smith, Juan J Merelo-Guervós, John A Bullinaria, Jonathan Rowe, Peter Ti\vno Ata Kabán, Hans-Paul Schwefel, eds.), Springer, volume 3242, . [bibtex] [pdf]
[16]Binary Merge Model Representation of the Graph Colouring Problem (, and ), In Evol Comput in Comb Optim (J Gottlieb, G Raidl, eds.), Springer, . [bibtex] [pdf]
2003
[15] Comparing Evolutionary Algorithms on Binary Constraint Satisfaction Problems (, and ), In IEEE Trans Evol Comput, volume 7, . [bibtex] [pdf]
[14]Evolving binary constraint satisfaction problem instances that are difficult to solve (), In IEEE Trans Evol Comput, IEEE Press, volume 4, . [bibtex] [pdf]
2002
[13]Measuring the Searched Space to Guide Efficiency: The Principle and Evidence on Constraint Satisfaction ( and ), In Parallel Problem Solving from Nature (JJ Merelo, A Panagiotis, H-G Beyer, José-Luis Fernández-Villacañas, Hans-Paul Schwefel, eds.), Springer, volume 2439, . [bibtex]
[12]Comparing Classical Methods for Solving Binary Constraint Satisfaction Problems with State of the Art Evolutionary Computation (), In Applications of Evolutionary Computing (S Cagnoni, J Gottlieb, E Hart, M Middendorf, G Raidl, eds.), Springer, volume 5, . [bibtex] [pdf]
[11]Use of Evolutionary Algorithms for Telescope Scheduling (, , , and ), In Integrated Modeling of Telescopes (Torben Anderson, ed.), The International Society for Optical Engineering (SPIE), volume 4757, . [bibtex] [pdf]
2001
[10]Adaptive Genetic Programming Applied to New and Existing Simple Regression Problems ( and ), In Genetic Programming (J Miller, M Tomassini, PL Lanzi, C Ryan, AGB Tettamanzi, WB Langdon, eds.), Springer, . [bibtex] [pdf]
[9]A "Futurist" approach to dynamic environments (, , and ), In Genetic and Evolutionary Computation (J Branke, Th. Bäck, eds.), Morgan Kaufmann Publishers, volume 3, . [bibtex] [pdf]
[8]An Engineering Approach to Evolutionary Art ( and ), In Genetic and Evolutionary Computation (Lee Spector, Erik D Goodman, Annie Wu, WB Langdon, Hans-Michael Voigt, Mitsuo Gen, Sandip Sen, Marco Dorigo, Shahram Pezeshk, Max H Garzon, Edmund Burke, eds.), Morgan Kaufmann Publishers, volume 3, . [bibtex] [pdf]
2000
[7]Constraint Satisfaction Problems and Evolutionary Algorithms: A Reality Check (), In Artificial Intelligence (van den Bosch, A, H Weigand, eds.), volume 12, . [bibtex] [pdf]
[6]De Creatieve Computer (The Creative Computer) (), In AIgg Kennisgeving, Artificiële Intelligentie gebruikers groep, volume 13, . [bibtex] [pdf]
1999
[5]Population dynamics and emerging features in AEGIS (, and ), In Genetic and Evolutionary Computation (W Banzhaf, J Daida, AE Eiben, MH Garzon, V Honavar, M Jakiela, RE Smith, eds.), Morgan Kaufmann Publishers, . [bibtex] [pdf]
[4]Adapting the Fitness Function in GP for Data Mining (, and ), In Genetic Programming (R Poli, P Nordin, WB Langdon, TC Fogarty, eds.), Springer, . [bibtex]
[3]A comparison of genetic programming variants for data classification (, and ), In Advances in Intelligent Data Analysis (DJ Hand, JN Kok, MR Berthold, eds.), Springer, . [bibtex]
1998
[2]Graph Coloring with Adaptive Evolutionary Algorithms (, and ), In Journal of Heuristics, Kluwer Academic Publishers, volume 4, . [bibtex]
[1]Solving Binary Constraint Satisfaction Problems using Evolutionary Algorithms with an Adaptive Fitness Function (, , and ), In Parallel Problem Solving from Nature (AE Eiben, Th. Bäck, M Schoenauer, H-P Schwefel, eds.), Springer, . [bibtex]
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